BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034A09LP1|AL429841
(849 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig608 1300 0.0
>3x_Contig608
Length = 2255
Score = 1300 bits (654), Expect = 0.0
Identities = 690/704 (98%)
Strand = Plus / Minus
Query: 1 gatcaggatttgttccatacttcaagacatctgttcaatacttgcaacagtttattcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gatcaggatttgttccatacttcaagacatctgttcaatacttgcaacagtttattcaaa 656
Query: 61 acgtctcccaaatcgaaggtttgtctgaagacgacattgaattgaaggccttgactttcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 acgtctcccaaatcgaaggtttgtctgaagacgacattgaattgaaggccttgactttcg 596
Query: 121 aaaacatctccaccatgggtagagcggtcaaatccgctgcttttgctgaatatgctgagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 aaaacatctccaccatgggtagagcggtcaaatccgctgcttttgctgaatatgctgagc 536
Query: 181 cattggtgaacgctgcctacgaagctatcaaaactgattctgctagattgagagagtctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cattggtgaacgctgcctacgaagctatcaaaactgattctgctagattgagagagtctg 476
Query: 241 gttacgccttcattgccaatatggcaaaggtttatggtaaggactttgctcctttcctac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gttacgccttcattgccaatatggcaaaggtttatggtaaggactttgctcctttcctac 416
Query: 301 aaaccatcattcctgaaatatttaaaactctcgaacaagaagaataccaatttaactttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aaaccatcattcctgaaatatttaaaactctcgaacaagaagaataccaatttaactttg 356
Query: 361 acggtgacgaagacttcttggaaggcatcgaagatttggatgaagaagaactacaaagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 acggtgacgaagacttcttggaaggcatcgaagatttggatgaagaagaactacaaagca 296
Query: 421 aatttaccgtaaacactggtatcgcatacgaaaaggaagttgctgctgctgctttgtcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aatttaccgtaaacactggtatcgcatacgaaaaggaagttgctgctgctgctttgtcag 236
Query: 481 aattagccattgcttccaaagaacacttcttggaatacgttgaaccatctttgaaggttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 aattagccattgcttccaaagaacacttcttggaatacgttgaaccatctttgaaggttt 176
Query: 541 tagctgagcaagtcaatgagtcatatggtttgavagavacggctctacactccatgtggg 600
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||
Sbjct: 175 tagctgagcaagtcaatgagtcatatggtttgaaagaaacggctctacactccatgttgg 116
Query: 601 ctattgttaaagctgttttgttgactgccaacttgaaagaaggtgagtatccaaagggtg 660
||||||||||| ||||||| |||||||||||||| ||| | | ||||||||||||||
Sbjct: 115 ctattgttaaatctgtttttttgactgccaactttaaatattttttgtatccaaagggtg 56
Query: 661 ttccatcaggctcttatgtcgatgctagcgcgttascgtttatt 704
||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 55 ttccatcaggctcttatgtcgatgcaagcgcgttaccgtttatt 12
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7623
Number of Sequences: 1807
Number of extensions: 7623
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 849
length of database: 10,358,551
effective HSP length: 16
effective length of query: 833
effective length of database: 10,329,639
effective search space: 8604589287
effective search space used: 8604589287
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)